QUOTE(dangrouche @ Feb 2 2014, 10:41 PM)
I had a domestic made output seal and it was not as thick as OEM, and it actually sat below the level of the tranny case and below the machined surface exposing a bit of the race. You want it as flush as possible, toward the centerline of the vehicle. I had put a new german seal on and it seemed to seep tranny fluid, so I should have just pressed it in deeper. After installing the second domestic new one, I saw that the domestic seal was thinner than the german one. But no seepage.
1 - The part the seal goes against is not a race. The race is what the bearing runs on.
2- Just because a seal is not as thick does not mean that you need to seat it in further. Seat it at the shoulder, this is sufficient. The only reason to change the depth is to avoid a wear pattern on the output flange shaft. Seating a seal too deep means you run the risk of contacting the diff bearing and ruining the seal. There is no benefit in seating it deeper.
There is no size difference from side to side on the transmission output shaft bores. There may be seal variances in thickness, but the ID and OD should be identical. Seating it correctly protects from having it warp. If you are seeing significant warping, the seal may not do its job correctly.